Published
CoralNet-Toolbox: Human-in-the-Loop Annotation and Model Development for Benthic Imagery
J. Pierce, T. Battista, S. Sandin, and F. Kuester
OCEANS 2026
Sep. 21–24, 2026
Monterey, CA, USA
to be published
Improved Ground-Truthing and Benthic Habitat Characterization with Machine Learning Models and 3D Photogrammetry
P. A. Wernette, P. Esselman, A. Geglio, A. Galloway, S. Moradi, and J. Pierce
OCEANS 2025 – Great Lakes
2025
Chicago, IL, USA
Integrating Widespread Coral Reef Monitoring Tools for Managing both Area and Point Annotations
G. Pavoni, J. Pierce, C. Edwards, M. Corsini, V. Petrovic, and P. Cignoni
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., vol. XLVIII-2-2024
2024
Las Vegas, NV, USA
Standard Operating Procedures for the Use of Large-Area Imaging in Tropical Shallow Water Coral Reef Monitoring, Research and Restoration: Applications for Mission: Iconic Reefs Restoration in the Florida Keys National Marine Sanctuary
S. Cook, S. Rojano, C. Edwards, M. Bollinger, J. Pierce, and T. Viehman
NOAA Tech. Memo. NOS NCCOS 320
2023
Silver Spring, MD, USA
Classifying 3-D Models of Coral Reefs Using Structure-from-Motion and Multi-View Semantic Segmentation
J. Pierce, M. J. Butler IV, Y. Rzhanov, K. Lowell, and J. A. Dijkstra
Frontiers in Marine Science, vol. 8
2021
Reducing Annotation Times: Semantic Segmentation of Coral Reef Survey Images
J. Pierce, Y. Rzhanov, K. Lowell, and J. A. Dijkstra
Global OCEANS 2020: Singapore – U.S. Gulf Coast
2020
Biloxi, MS, USA
Presented
CoralNet-Toolbox: Automation for Panoptic Segmentation of Benthic Habitat and Large Area Imagery
J. Pierce, T. Battista, S. Sandin, and F. Kuester
16th International Coral Reef Symposium (ICRS 2026), International Coral Reef Society
Jul. 19–24, 2026
New Zealand International Convention Centre, Auckland, New Zealand
From in-situ to in-silico: A Brief History of Computer Vision and Coral Reef Ecology
J. Pierce and F. Kuester
Marine Robotics Seminar Series, Queensland University of Technology
Jun. 29, 2026
Brisbane, QLD, Australia
Invited seminar
Deep Learning Assisted Identification of Crystal and Vesicle Populations in SEM Imagery of Submarine Volcanic Rocks
M. Shaw, J. Tomer, J. Pierce, and A. Soule
American Geophysical Union Annual Meeting (AGU25)
Dec. 15–19, 2025
Ernest N. Morial Convention Center, New Orleans, LA, USA
Poster presentation, Abstract no. V41B-0060
CoralNet-Toolbox: Tools for Annotating and Developing Machine Learning Models for Benthic Imagery
J. Pierce, T. Battista, and F. Kuester
7th NOAA Workshop on Generative AI Applications in Environmental Sciences, NOAA Center for AI (NCAI)
Sep. 16–17, 2025
NSF NCAR Center Green Campus, Boulder, CO, USA
Deep Cluster: Selecting Better Lakebed Images for More Accurate Habitat Mapping
J. Pierce, C. Goetsch, and B. Wade
Earth System Data Science in the Cloud (ESDS-4), North Carolina Institute for Climate Studies
Spring 2025
Asheville, NC, USA
Capstone project presentation
Emerging Computer Vision Technologies: Applications for Benthic Habitat Imagery
J. Pierce
Reef Futures 2024, Coral Restoration Consortium
Dec. 9–13, 2024
Iberostar Resort Complex, Riviera Maya, Mexico
Multi-View Label Classification in Viscore, TagLab, and CoralNet-Toolbox for Precise and Efficient Estimates of Coral Cover Using Large-Area Imaging Data
J. Pierce, V. Petrovic, C. Edwards, G. Pavoni, M. Corsini, T. Viehman, S. Sandin, P. Cignoni, and F. Kuester
Reef Futures 2024, Coral Restoration Consortium
Dec. 9–13, 2024
Iberostar Resort Complex, Riviera Maya, Mexico
Innovative Approach to Great Lakes Benthic Mapping: Integrating AUV, ROV and Drop Camera Data with Tator
A. Mabrouk, C. Menza, C. Goetsch, L. Kline, N. Hunt, J. Pierce, K. Urquhart, K. Edwards, C. Taylor, T. Battista, and M. Taipan
5th Marine Imaging Workshop (MIW 2024), IEEE Oceanic Engineering Society
Oct. 8–10, 2024
Monterey Conference Center, Monterey, CA, USA
CoralNet-Toolbox: AI and SfM for Coral Reef Imagery Analysis
J. Pierce and T. Battista
5th NOAA Workshop on Leveraging AI in Environmental Sciences, NOAA Center for AI (NCAI)
Sep. 19–21, 2023
Virtual
Absolute Ocean: A Cloud-Based Platform with Automatic Detection of Targets in Sonar Data
J. Pierce, Q. Iqbal, and E. Martzial
Canadian Hydrographic Conference (CHC 2022), Canadian Hydrographic Association
Jun. 6–9, 2022
Hilton Lac-Leamy, Gatineau, QC, Canada
Presented on behalf of Terradepth, Inc.
Automating the Boring Stuff: A Deep Learning and Computer Vision Workflow for Coral Reef Habitat Mapping
J. Pierce, Y. Rzhanov, K. Lowell, M. J. Butler IV, and J. A. Dijkstra
Graduate Research Conference, University of New Hampshire Graduate School
Apr. 2020
Durham, NH, USA
Oral presentation
Coral Reef Restoration – Is It Viable for Hong Kong?
D. M. Baker, V. Yu, J. Pierce, and V. Sheng
2nd International Workshop on Eco-Shoreline Designs for Sustainable Coastal Development, School of Biological Sciences, The University of Hong Kong
2018
Hong Kong SAR, China
A Preliminary Fabric Analysis on the Spatial Distribution of Artifacts from the Ryan-Harley Site (8JE1004)
J. Pierce and M. Smith
19th Annual Student Research Week, Texas A&M University
Mar. 28 – Apr. 1, 2016
Memorial Student Center, College Station, TX, USA
Poster presentation — 2nd Place, Undergraduate Division